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Re: missing table file

From: Leonid Gibiansky <LGibiansky>
Date: Thu, 21 Jan 2010 00:12:08 -0500

Sometimes table file is not printed if/when covariance step fail. Try
remove $COV statement; it could help to get $TABLE output. Also,
sometimes FO method is completed successfully but POSTHOC fails; then
table file is not produced either. But the error message seems to point
to $COV step.
Thanks
Leonid

--------------------------------------
Leonid Gibiansky, Ph.D.
President, QuantPharm LLC
web: www.quantpharm.com
e-mail: LGibiansky at quantpharm.com
tel: (301) 767 5566




Nick Holford wrote:
> Matt,
>
> WFN would not affect whether NONMEM decides to output a table file.
>
> I have never seen the error message RMATX- 1. Some errors will stop
> NONMEM from producing a table file.
>
> Jing,
>
> There is no such thing as a MASM listing file. I suspect you are talking
> about the raw NONMEM output file with the extension .lst.
>
> Please look at the .lst file in the run folder. You should find more
> information there about the error and perhaps some indication of why it
> happened.
>
> Nick
>
> Fidler,Matt,FORT WORTH,R&D wrote:
>> Jing,
>>
>> It appears that you ran this using Wings for NONMEM. Have you tried
>> running using nmfe6 or nmfe7?
>>
>> Matt.
>>
>> ------------------------------------------------------------------------
>> *From:* Jing Nie [mailto:hollidayy
>> *Sent:* Wednesday, January 20, 2010 4:00 PM
>> *To:* Fidler,Matt,FORT WORTH,R&D
>> *Subject:* RE: [NMusers] missing table file
>>
>> Matt,
>>
>> The NONMEM output I got as following:
>>
>> THETA: KOUT SMAX SC50
>> ETA: BSVKOUT BSV_SMAX BSV_SC50
>> ERR:
>>
>> 1drA_amt.lst 257.613 eval=430 sig=3.3 sub=53 obs=53 CCIL=YNYN
>> NVI1.2 PV1.0
>> THETA = 0.0538 0.337 346
>> ETASD = 0 1.01489 22.2711
>> ERRSD = 5.46809
>>
>> MINIMIZATION SUCCESSFUL
>>
>> P VAL.: 0.68E+00 0.11E-01 0.52E+00
>> ERROR RMATX- 1
>>
>> the run is able to generate .smy, .smr,.ctl and MASM listing file but
>> no table.
>>
>> Jing
>>
>>
>>
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>>
>>
>>
>> ------------------------------------------------------------------------
>> From: Matt.Fidler
>> To: hollidayy
>> Date: Wed, 20 Jan 2010 15:48:59 -0600
>> Subject: RE: [NMusers] missing table file
>>
>> Jing,
>>
>> Please post all of your nonmem output.
>>
>> Matt.
>>
>> ------------------------------------------------------------------------
>> *From:* owner-nmusers
>> [mailto:owner-nmusers
>> *Sent:* Wednesday, January 20, 2010 1:01 PM
>> *To:* nmusers
>> *Subject:* [NMusers] missing table file
>>
>> Dear NMusers,
>>
>> I'm trying to run a control stream using NONMEM6. Minimization was
>> successful but there is one error message RMATX -1. I get the output
>> file with obj values and other estimates but I don't have the table
>> file. My table record is posted below:
>>
>> $TABLE ID TIME IPRE NOPRINT ONEHEADER FILE=1.fit
>>
>> I searched the archive and add the carriage return to the $table
>> record and still got no tables.
>> Is it has something to do with this error message? Any suggestion is
>> appreciated.
>>
>>
>> Jing
>>
>>
>>
>>
>>
>>
>>
>>
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>
> --
> Nick Holford, Professor Clinical Pharmacology
> Dept Pharmacology & Clinical Pharmacology
> University of Auckland,85 Park Rd,Private Bag 92019,Auckland,New Zealand
> tel:+64(9)923-6730 fax:+64(9)373-7090 mobile:+64(21)46 23 53
> email: n.holford
> http://www.fmhs.auckland.ac.nz/sms/pharmacology/holford
>
Received on Thu Jan 21 2010 - 00:12:08 EST

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